Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVDIGRIYDNKDNTDAIRILVDRVWPRGISKRTANLDYWLKDIAPSTELRQWFQHDPKLFGAFKEKYEKELRDQDAQKDAFEKLKDIVNQHNHVLLLYAAKDTKHNQAVVLQQLLNT
4Q6X Chain:A ((129-206))
-------------GADVARNLLDNYWQRGDSKARAYIVLSLETIA-GAEFITGFKDTMKKEG-FDEKYYDKIGWDFSGNEDLGKIRDVLESHG-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Q6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2508 for 486 contacts (-5.2/contact) +
2D Compatibility (PS) -7918 + (NN) -1348 + (LL) 3240
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -13734.0 ( -28.26 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_4Q6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q6X-query.scw
PDB file :
Tito_Scwrl_4Q6X.pdb
: