Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------------------MKLNQRYVKVFALYFVSIVTANIIVKNNNLIKTLIQTIAGYTVFAVGLKYLTKRKNK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4N5H Chain:X ((1-315)) | MADEEAMLAKVQASWAQTAARDKARYADERVPEDVHWETEYRYEQSADPQQTLNLYYPAKRRNATMPTVIDIHGGGWFYGDRNLNRNYCRYLAS---------------------QGYAVMGMGYRLLPDVDLRGQIQDIFASLRWLSHFGPQRGFDLDHVLLTGDSAGGHLASLVACIQQSAELQELFGVSRVNFNFTLVALVCPVAEPSKLPEAAGDMSDMAAFYLDKLSGGDQALVDHLNFSQVVKGLDLPPFMLIGGQNDSFYLQSQALLKVFDANHVTYTTKLWPASAGPHLKHVFNVQHWEWPESIETNLEMLRTFDALSKQQDQAEENE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11763 for 149 contacts (-78.9/contact) +
2D Compatibility (PS) -3733 + (NN) -150 + (LL) 2188
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -16608.0 ( -111.46 by residue)
QMean score : 0.235
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