Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MGQQLVHKENIMLNLSATDKESVLSQMSDVLFQNGFVKSTFKDAVIDREKEFATGLPTHLCSVAIPHTDVEHINHRTIGVAVLEKEVPFIEMGTLDQQTEVKIVFMLAMDKVDDQLKLLQQLMQIFQSEEKLEQILRTKDETILATLINDYLEYN
1XIZ Chain:A ((-1-153))
AMQDIHFRRHYVRHLPKEVSQNDIIKALASPLINDGMVVSDFADHVITREQNFPTGLPVEPVGVAIPHTDHKYVRQNAISVGILAEPVNFEDMGGEPDPVPVRVVFMLALGESNKQLNVLGWIMDVIQDEDFMQQLLVMNDDEIYQSIYTRISE--
General information:
TITO was launched using:
RESULT:
Template:
1XIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88684 for 1201 contacts (-73.8/contact) +
2D Compatibility (PS) -16907 + (NN) -6212 + (LL) 12
1D Compatibility (HY) -14800 + (ID) 2350
Total energy: -128941.0 ( -107.36 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1XIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XIZ-query.scw
PDB file :
Tito_Scwrl_1XIZ.pdb
: