Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYAGILAGGIGSRMGNVPLPKQFLDLDNKPILIHTLEKFILINDFEKIIIATPQQWMTHTKDTLRKFKISDERIEVIQGGSDRNDTIMNIVKHIESTNGINDDDVIVTHDAVRPFLTHRIIKENIQAALEYGAVDTVIDAIDTIVTSKDNQTIDAIPVRNEMYQGQTPQSFNINLLKESYAQLSDEQKSILSDACKIIVETNKPVRLVKGELYNIKVTTPYDLKVANAIIRGGIADD
4JIS Chain:A ((3-233))
MIYAEILA-----------MPKQFLPLNKRPIIIHTVEKFLLNDRFDKILIVSPKEWINHTKDILKKFIGQDDRLVVVEGGSDRNESIMSGIRYIEKEFGIQDNDVIITHDSVRPFLTHRIIDENIDAVLQYGAVDTVISAIDTIIASEDQEFISDIPVRDNMYQGQTPQSFRISKLVELYNKLSDEQKAVLTDACKICSLAGEKVKLVRGEVFNIKVTTPYDLKVANAIL-------
General information:
TITO was launched using:
RESULT:
Template:
4JIS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103803 for 1751 contacts (-59.3/contact) +
2D Compatibility (PS) -23375 + (NN) -7130 + (LL) -280
1D Compatibility (HY) -28000 + (ID) 6900
Total energy: -169488.0 ( -96.79 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_4JIS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JIS-query.scw
PDB file :
Tito_Scwrl_4JIS.pdb
: