Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNKVVILGSTNVDQFLTVERYAQPGETLHVEE-AQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKAAHIDTSYIIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQ-DNLADAIDFGNKASSLTVQKHGAQASIPLLEEVNQV |
3RY7 Chain:A ((2-304)) | -TNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQK-AFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLN-KSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVNQV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -161045 for 2584 contacts (-62.3/contact) +
2D Compatibility (PS) -32831 + (NN) -8389 + (LL) 336
1D Compatibility (HY) -38000 + (ID) 14700
Total energy: -254629.0 ( -98.54 by residue)
QMean score : 0.575
|
|
|