Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ
2VRZ Chain:A ((4-98))
-AMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGL-
General information:
TITO was launched using:
RESULT:
Template:
2VRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1033 for 521 contacts (-2.0/contact) +
2D Compatibility (PS) -10427 + (NN) -603 + (LL) 328
1D Compatibility (HY) -10000 + (ID) 4750
Total energy: -26485.0 ( -50.83 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2VRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VRZ-query.scw
PDB file :
Tito_Scwrl_2VRZ.pdb
: