Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFGMKVNEQITLKILEAHDTEALFNLVNRSRNSLREWLPWVDATEQPSDTRAFIKRGLLQFADGNGFQCGIWYEGTLVGVIGLHEINHMHRKTSLGYYLDKQFEGHGIMTQAVEALIKYCFEELDLNRIEISAAVNNEKSRAIPERLGFTREGMLRDNELLNGIYSSSYIYSLLKSEYDQK
3R9G Chain:A ((15-184))
--GIKVNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDHANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYS---------
General information:
TITO was launched using:
RESULT:
Template:
3R9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96503 for 1277 contacts (-75.6/contact) +
2D Compatibility (PS) -17940 + (NN) 28 + (LL) 1032
1D Compatibility (HY) -14400 + (ID) 2700
Total energy: -130483.0 ( -102.18 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3R9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9G-query.scw
PDB file :
Tito_Scwrl_3R9G.pdb
: