Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGVMLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIVTQSVMIGIMSGLMSFGIIGAYSIIFPLT---FKFGA------ENSNVIMIVASILLLFSFVVFFFIYGMVSGASALEFEKISTEGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL |
| 4Q9L Chain:A ((708-768)) | ----------------------------------------------------------------------------------------------------------VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38893 for 257 contacts (-151.3/contact) +
2D Compatibility (PS) -5022 + (NN) 1166 + (LL) 14828
1D Compatibility (HY) -7200 + (ID) 900
Total energy: -36021.0 ( -140.16 by residue)
QMean score : 0.197
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