Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDYVYNLVKKHHSVRKFKNKPLSEDVVKKLVEAGQSASTSSFLQAYSIIGIDDEKIKENLREVSG-QPYVVENGYLFVFVIDYYRHHLVDQHAETDMENAYGSTEGLLVGAIDAALVAENIAVTAEDMGYGIVFLGSLRNDVERVREILDLPDYVFPVFGMAVGEPADDENGAAKPRLPFDHVFHHNKYHADKETQYAQMADYDQTISEYYDQRTNGNRKETWSQQIEMFLGNKARLDMLEQLQKSGLIQR
3N2S Chain:A ((11-246))
-----------HRSIRSFTDQLLTAEEIDTLVKSAQAASTSSYVQAYSIIGVSDPEKKRELSVLAGNQPYVEKNGHFFVFCADLYRHQQLAEEKGEHISELLENTEMFMVSLIDAALAAQNMSIAAESMGLGICYIGGIRNELDKVTEVLQTPDHVLPLFGLAVGHPANL--SGKKPRLPKQAVYHENTYNVNTDDFRHTMNTYDKTISDYYRERTNGKREETWSDQILNFMKQKPRTYLNDYVKEKGF---
General information:
TITO was launched using:
RESULT:
Template:
3N2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110192 for 1726 contacts (-63.8/contact) +
2D Compatibility (PS) -25889 + (NN) -11696 + (LL) 1344
1D Compatibility (HY) -20800 + (ID) 5100
Total energy: -172333.0 ( -99.85 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_3N2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N2S-query.scw
PDB file :
Tito_Scwrl_3N2S.pdb
: