Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFTAIAKAIFVLGILTTSVMITENQSVNAKGKYEKMNRLYDTNKLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENKYKEKTHGLDVFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGSADKGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK
3R2T Chain:A ((55-249))
-------------------------------------NRLYDTNKLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENKYKEKTHGLDVFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGSADKGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK
General information:
TITO was launched using:
RESULT:
Template:
3R2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52968 for 1454 contacts (-36.4/contact) +
2D Compatibility (PS) -20498 + (NN) -695 + (LL) 3596
1D Compatibility (HY) -28800 + (ID) 9750
Total energy: -109115.0 ( -75.04 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3R2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2T-query.scw
PDB file :
Tito_Scwrl_3R2T.pdb
: