Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLLEHYSDDKVK----IYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQLAARSYAEKYGAVYMN-QFESEHNPDTYFHTLGPELTSAL-QQIDYFVAGIGSGGTFTGTARYLKQH--HVQCYAVEPEGSVLNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGT-IVVVFPDGSDRYMSKQIFNYEENDYE |
| 4R2V Chain:A ((9-305)) | ----DAIGRTPVFKFTN-KDYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIEEGFKTGKITSKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGVEPEGSILNGGEPGPHEIEGIGVEFIPPFFENLDIDGFETISDEEGFSYTRKLAKKNGLLVGSSSGAAFVAALKEAQRLPEGSQVLTIFPDVADRYLSKGIY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95617 for 2622 contacts (-36.5/contact) +
2D Compatibility (PS) -31225 + (NN) -6157 + (LL) 908
1D Compatibility (HY) -24000 + (ID) 7300
Total energy: -163391.0 ( -62.32 by residue)
QMean score : 0.427
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