Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
4D3H Chain:C ((20-128))
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSP-----------------VEVGGATVFVMPVDAFHQF
General information:
TITO was launched using:
RESULT:
Template:
4D3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57779 for 607 contacts (-95.2/contact) +
2D Compatibility (PS) -10382 + (NN) -6219 + (LL) 396
1D Compatibility (HY) -13600 + (ID) 4600
Total energy: -92184.0 ( -151.87 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_4D3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D3H-query.scw
PDB file :
Tito_Scwrl_4D3H.pdb
: