Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPVQNGPFEILDVTDRDRMFELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALEAARTYNL-HFFTPSSIGAFGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPGGGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYNLSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDLASMTKLMLEAIEQKDTVKNNN |
| 2YY7 Chain:A ((2-311)) | NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDF-RQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138336 for 2766 contacts (-50.0/contact) +
2D Compatibility (PS) -33082 + (NN) -14783 + (LL) 456
1D Compatibility (HY) -28400 + (ID) 7850
Total energy: -221995.0 ( -80.26 by residue)
QMean score : 0.446
|
|
|