Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEHNPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAM----VMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTDPEYWKKLFKRYDDWINSF-NACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR
2JAQ Chain:A ((1-201))---------MKIAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARSKQLK-------NIIFDRTLLEDP-IFMKVNYDLNNVDQTDYNTYIDFYNNVVLEN-----KLSFDIVIYLRVSTKTAISRIKKRGRSEELLIGEEYWETLNKNYEEFYKQNVYDFPFFVVDAEL-DVKT---QIELIMNKLNSI----------


General information:
TITO was launched using:
RESULT:

Template: 2JAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98459 for 1397 contacts (-70.5/contact) +
2D Compatibility (PS) -19762 + (NN) -6865 + (LL) 1628
1D Compatibility (HY) -17200 + (ID) 3050
Total energy: -143708.0 ( -102.87 by residue)
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_2JAQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAQ-query.scw
PDB file : Tito_Scwrl_2JAQ.pdb: