Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD
2BKX Chain:A ((1-241))
MKVMECQTYEELSQIAARITADTIKEKPDAVLGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDDPNSYHFYMNDRFFQHI-DSKPSRHFIPNGNADDLEAECRRYEQLVDSLGDTDIQLLGIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLR----------
General information:
TITO was launched using:
RESULT:
Template:
2BKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138244 for 2114 contacts (-65.4/contact) +
2D Compatibility (PS) -26415 + (NN) -16962 + (LL) 860
1D Compatibility (HY) -16800 + (ID) 5400
Total energy: -202961.0 ( -96.01 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2BKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKX-query.scw
PDB file :
Tito_Scwrl_2BKX.pdb
: