Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFSDYQLILDELKMTLSHVEADEFSTFASKILHAEHIFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTPAIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGS---AQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNHANLE
1M3S Chain:A ((10-185))
---------ILNELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPKD-----YKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETMFTHHANLE
General information:
TITO was launched using:
RESULT:
Template:
1M3S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111943 for 1339 contacts (-83.6/contact) +
2D Compatibility (PS) -18251 + (NN) -10755 + (LL) 780
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -155869.0 ( -116.41 by residue)
QMean score : 0.727
(partial model without unconserved sides chains):
PDB file :
Tito_1M3S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M3S-query.scw
PDB file :
Tito_Scwrl_1M3S.pdb
: