Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEV-ISKIDDVVLGNVVGN---GGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETA-LPEFYERASF-------APEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK----GEIFNTDESLKSHIPKDNFGRFKPVIK-GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNI--SNTQLNIWGGALASGHPYGASGAQLVTRLFYMF---DKETMIASMGIGG-GLGNAALFTRF |
| 1ULQ Chain:A ((3-399)) | --EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRS-GVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLA-TMCIGVGQGIAVVVEG- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ULQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200411 for 3594 contacts (-55.8/contact) +
2D Compatibility (PS) -40037 + (NN) -11809 + (LL) 92
1D Compatibility (HY) -21600 + (ID) 7050
Total energy: -280815.0 ( -78.13 by residue)
QMean score : 0.490
|
|
|