Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSNASDKVASASSLSQDEVKELNRLLGKVIHAFDETKEK
2BV6 Chain:A ((5-140))
-----NLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSNASDKVASASSLSQDEVKELNRLLGKVIHAF------
General information:
TITO was launched using:
RESULT:
Template:
2BV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74042 for 865 contacts (-85.6/contact) +
2D Compatibility (PS) -14006 + (NN) -2915 + (LL) 580
1D Compatibility (HY) -20000 + (ID) 6800
Total energy: -117183.0 ( -135.47 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2BV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BV6-query.scw
PDB file :
Tito_Scwrl_2BV6.pdb
: