Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAEE
3IV4 Chain:A ((1-106))
VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYERD-DGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGE-VWNRDHGDINVSSLAQAEE
General information:
TITO was launched using:
RESULT:
Template:
3IV4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25337 for 790 contacts (-32.1/contact) +
2D Compatibility (PS) -11293 + (NN) -3025 + (LL) 416
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -50189.0 ( -63.53 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_3IV4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IV4-query.scw
PDB file :
Tito_Scwrl_3IV4.pdb
: