Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVMLDIFYP------------------ELITIGSNSVIGYNVTILTHEALVDE------FRYG-PVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
4ISX Chain:A ((32-182))
----------------------KLTRLFNNTLEDEYEK-------REDILRQLFG-SVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRV-----
General information:
TITO was launched using:
RESULT:
Template:
4ISX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81480 for 821 contacts (-99.2/contact) +
2D Compatibility (PS) -13463 + (NN) -2146 + (LL) 3540
1D Compatibility (HY) -12000 + (ID) 2650
Total energy: -108199.0 ( -131.79 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_4ISX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ISX-query.scw
PDB file :
Tito_Scwrl_4ISX.pdb
: