Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLE-----DMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVI-IDVMFLEASTEKLISRYKE----TRRAHPLMEQGKR--SLINAINDEREHLSQIRSIANFVID--TTKLSPKELKERIRRYYEDEE-FETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK |
| 3GFO Chain:A ((24-218)) | LKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIM------KLRESIGIVFQDPDNQLFSA--SVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVL---------ILDEPTAGLDPMGVS-EIMKLLVEMQKELGITIIIATHDID-IVPLYCDNVFVMK-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2008 for 1291 contacts (1.6/contact) +
2D Compatibility (PS) -19120 + (NN) -3699 + (LL) 8584
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -21477.0 ( -16.64 by residue)
QMean score : 0.246
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