Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
4EMP Chain:V ((9-197))---IPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIAIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP---


General information:
TITO was launched using:
RESULT:

Template: 4EMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119297 for 1420 contacts (-84.0/contact) +
2D Compatibility (PS) -20514 + (NN) -7890 + (LL) 524
1D Compatibility (HY) -25200 + (ID) 9400
Total energy: -181777.0 ( -128.01 by residue)
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_4EMP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EMP-query.scw
PDB file : Tito_Scwrl_4EMP.pdb: