Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSLHFAILFWLALIFLVAATFILV-----LMKKTGKESKKESYLSFTVI-LYIFGFAILIYTFIFGVL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4RBN Chain:A ((4-792)) | IDTLATCTQQNRDAVYTLLRRYFTANRTLLLQSDLREGLLQTEQDCGQSDMLRAFVFRLQEGIFSSPWAYLALRPEIAKWEFMRIHQEHLIPEKLTISEFLKFKETVVKGEATESVLEVDFGPFNRGFPRLKESRSIGQGVIFLNRKLSSEMFSRIEAGHTSLLHFLGVHAIEGQQLMFSNNSHDIHAVRNQLRQALEMLETLDGTTPWIELAPKMNQLGFAPGWGHNANRVAETMNMLMDILEAPSPSALEEFLACIPMISRLLILSPHGYFGQDNVLGLPDTGGQVVYILDQVRALEKEMHDRLQLQGVQVEPKILIVTRLIPDAGDTTCNQRLEKVSGCTNTWILRVPFRKHNGEIIPHWISRFEIWPHLEIFAGDVEREALAELGGHPDLIIGNYSDGNLVATLLSRRLGVTQCNIAHALEKTKYLHSDIYWQENEDKYHFSCQYTADLLAMNSADFIVTSTYQEIAGTREAEGQYESYQAFSMPDLYRVIHGIDLFDPKFNIVSPGANADIYFPYSDPNRRLHSLIPEIESLIFDDATNLPARGYLQDPDKPLIFTMARLDRIKNITGLVELYAASPRLRSLANLVIVGGKIDPQHSSDHEEQEQIHRMHQLMDEHELDQQVRWLGMRLDKNLAGELYRYIADKRGIFVQPALFEAFGLTIIEAMASGLPTFATRYGGPLEIIQNNRSGFHIDPNQGAATADLIADFFEKNLENPQEWERISQGALDRVASRYTWKLYAERMMTLSRIYGFWKFVSGLEREETDRYLNMFYHLQFRPLANRLAH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RBN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55614 for 332 contacts (-167.5/contact) +
2D Compatibility (PS) -6414 + (NN) 496 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -65482.0 ( -197.23 by residue)
QMean score : 0.377
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