Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCK-VSERMLDIANEIL-QLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK
4WXT Chain:A ((42-117))
-----------------------WATWCGPCKMVAPVLEEIASERGDHLTVAKLDVDANPETAQNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLREL-
General information:
TITO was launched using:
RESULT:
Template:
4WXT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54779 for 440 contacts (-124.5/contact) +
2D Compatibility (PS) -7485 + (NN) 655 + (LL) 1476
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -66183.0 ( -150.42 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_4WXT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WXT-query.scw
PDB file :
Tito_Scwrl_4WXT.pdb
: