Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MYFVLAIFTIISASVSLGYSIQAC------ASSHNINAYYALSRSLPLFLLAIFSLVIHSAIFLITISIAMILVQFLDAIVGYKSEDVFKTYGPLATSVVNLILLIVFLF-------------------------
2UUI Chain:A ((1-155))
MHHHHHHKDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFFHEGAAALCGLVYLFARLRYFQGYARSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLLPW
General information:
TITO was launched using:
RESULT:
Template:
2UUI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105737 for 724 contacts (-146.0/contact) +
2D Compatibility (PS) -10675 + (NN) -5196 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -126408.0 ( -174.60 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_2UUI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UUI-query.scw
PDB file :
Tito_Scwrl_2UUI.pdb
: