Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
1XG8 Chain:A ((1-102))
VVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKD---LTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
General information:
TITO was launched using:
RESULT:
Template:
1XG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89447 for 688 contacts (-130.0/contact) +
2D Compatibility (PS) -10730 + (NN) -3159 + (LL) -236
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -125272.0 ( -182.08 by residue)
QMean score : 0.730
(partial model without unconserved sides chains):
PDB file :
Tito_1XG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XG8-query.scw
PDB file :
Tito_Scwrl_1XG8.pdb
: