Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVRM---KFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGLGCEDKYHNVPGAEEYTHSIQTLSKARDT-------FHSISELPEGA---KVGIVGAGLSGIELASELRESRSDL-----------EIYLYDRGPRILRNFPEKLSKYVAKWFAKNNVTVVPNSNINKVEP-GKIYNCD-EPKDID--LVVWTAGIQPVEVVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCA-------DLPHAPSAQLAEVQGDQIADVLKKQWLNEPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG |
| 4NWZ Chain:A ((5-385)) | --SIVILGAGYGGIVAALGLQKRLNYNEADITLVNKNDYHYITTELHQPAAGTMHHDQARVGIKELIDEKKIKFVKDTVVAIDREQQKVTLQNGELHYDYLVVGLGSEPETFGIEGLREHAFSINSINSVRIIRQHIEYQFAKFAAEPERTDYLTIVVGGAGFTGIEFVGELADRMPELCAEYDVDPKLVRIINVEAAPTVLPGFDPALVNYAMDVLGGKGVEFKIGTPIKRCTPEGVVIEVDGEEEEIKAATVVWTGGVRGNSIVEKSGFE-TMRGRIKVDPYLRAPGHENIFIVGDCALIINEENNRPYPPTAQIAIQHGENVAANLAALIRGGSMTPFKPHIR--GTVASLGRNDAIGIVGGRKVYGHAASWLKKLIDMRYLY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187412 for 2857 contacts (-65.6/contact) +
2D Compatibility (PS) -38378 + (NN) -21926 + (LL) 580
1D Compatibility (HY) -21600 + (ID) 4950
Total energy: -273686.0 ( -95.79 by residue)
QMean score : 0.507
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