Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEF--SLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQ-DKPLHDVVIESIDVEE
2A2N Chain:C ((25-176))
------------------IIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPY-TLSMANAGSNTNGSQFFITV---VP-------------------------TPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK-
General information:
TITO was launched using:
RESULT:
Template:
2A2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65262 for 1169 contacts (-55.8/contact) +
2D Compatibility (PS) -15761 + (NN) -5153 + (LL) 2360
1D Compatibility (HY) -13600 + (ID) 4650
Total energy: -102066.0 ( -87.31 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2A2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2N-query.scw
PDB file :
Tito_Scwrl_2A2N.pdb
: