Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGVCTVDMTLTSMGCPMGPQIIDQVKTVLAEIPEIQDTEVNIVWSPPWTKDMMSRYAKIALGVS
1UWD Chain:A ((2-103))
MSKKVTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFDPPWTPERMSPELREKFGV-
General information:
TITO was launched using:
RESULT:
Template:
1UWD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81114 for 681 contacts (-119.1/contact) +
2D Compatibility (PS) -9984 + (NN) 1834 + (LL) -28
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -99942.0 ( -146.76 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1UWD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWD-query.scw
PDB file :
Tito_Scwrl_1UWD.pdb
: