Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MIRIQDNTIRDGMQQSNVRKSLIIKKEVLKQINKLNINSVEVGMCTTIEDEFNIHQFRDILSPE-KELVVLTRLNEKEIKKIVKL--KIHNLVVKILLPISDLHIKEKLNFSNKYYIQKIKDCLDILKKD-KKGVDICFED----ATRTSREKLKEYMEIISKYQVRTVTFADTVGCSTPLEYGDIFNYFVKKYSN-IIFSAHCHNDLGLATANTLAAILNGAKQIETTFLGIGERAGNAPIEEIITILTKKQIESTEFTLPDVYKTSINISKILDFQISENKPIIGENIFKHESGIHQDGTKKNINMYQYLVPSDLGLKNSQVVQFP--ISNISSKKILHNKFKSIVNTEEIDENISFYKLVNKFSPEVAPEDTVDLLQIIKRRSKDGNFK |
| 4OV4 Chain:A ((23-408)) | PKTIHIQDVTLRDGNQALKRPWTIDEKIEVFDLLVELNVDGIEVGFPSSNETEFHTCQVLSKRAPKGKPIAALSRANQNEIAVTWEAIQKADCPRMHIVYPVSDFSIKHVLKISEKEVLQKIRNSISFARSIVGPGIEIQFSGEHFGDAIENFAFTKEAFLTAIEAGANIINLPNTVERYRPMVFVNMVKEIKDVVKDKAIISIHTHNDLGMATATSVESVYVGAEQIEVALNGLGERAGNTNLYETAIALHQNG-ENLNINFQRIYPTAKRISELTGIPIGEKTPIIGEDIFSHRSGIHQHQSKGA---YRTFSPEFVGRMDKETISFTNQSGHKAIEFLLHQRGIQ-VSKEGIHHLFSLAKSISS-RENNREITEAELVALSQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112237 for 3009 contacts (-37.3/contact) +
2D Compatibility (PS) -38919 + (NN) -12714 + (LL) 976
1D Compatibility (HY) -13600 + (ID) 5350
Total energy: -181844.0 ( -60.43 by residue)
QMean score : 0.480
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