Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSRKQKQFLTQFLGGPNIYTEEHGHPMLRKRHMDFTITEFERDAWLENMQTAINRAAFPQGVGDYLFERLRLTANHMVNS
1UX8 Chain:A ((7-123))
---APYEAIGEELLSQLVDTFYERVASHPLLKPIFPSDLTETARKQKQFLTQYLGGPPLYTEEHGHPMLRARHLPFPITNERADAWLSCMKDAMDHVGLEGEIREFLFGRLELTARHMVN-
General information:
TITO was launched using:
RESULT:
Template:
1UX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53077 for 819 contacts (-64.8/contact) +
2D Compatibility (PS) -12583 + (NN) -6805 + (LL) 284
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -87681.0 ( -107.06 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1UX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UX8-query.scw
PDB file :
Tito_Scwrl_1UX8.pdb
: