Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKSCVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIVK
4M85 Chain:A ((4-185))
MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKSCVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIV-
General information:
TITO was launched using:
RESULT:
Template:
4M85.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135565 for 1407 contacts (-96.4/contact) +
2D Compatibility (PS) -19568 + (NN) -8598 + (LL) 64
1D Compatibility (HY) -29600 + (ID) 9100
Total energy: -202367.0 ( -143.83 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4M85.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M85-query.scw
PDB file :
Tito_Scwrl_4M85.pdb
: