Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYKQLEKLITLTNNDLNLVNRRFGQRTDITSEQLELLRILFNYDRLSQYDLTMKISREQSIVSRWIKKLVLKGYITSQQSSEDLRCKELILTDQARTLISQINNARCELIEARCQCLSEVELDNLNQLLDKLNQRRISL
2A61 Chain:A ((26-134))
------------------VLRDFG----ITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIERRENFIE---KITSDLGKEKSSKILDYLKE-----
General information:
TITO was launched using:
RESULT:
Template:
2A61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60089 for 699 contacts (-86.0/contact) +
2D Compatibility (PS) -11899 + (NN) -6612 + (LL) 2572
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -84228.0 ( -120.50 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_2A61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A61-query.scw
PDB file :
Tito_Scwrl_2A61.pdb
: