Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
4J7C Chain:G ((7-218))
--KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNYIDLSDEYSIVELLATRKLDSKSIIDLNVRAKYGCTILAIKHHGDICLSPAPEDIIREQDCLVIMGHKKDIKRFE------
General information:
TITO was launched using:
RESULT:
Template:
4J7C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143750 for 1602 contacts (-89.7/contact) +
2D Compatibility (PS) -22535 + (NN) -752 + (LL) 520
1D Compatibility (HY) -26400 + (ID) 5750
Total energy: -198667.0 ( -124.01 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_4J7C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J7C-query.scw
PDB file :
Tito_Scwrl_4J7C.pdb
: