Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNTNKFLLIPYLLWMVIFIIVPVVLLIYFSFLDINGHFSFTNYQQIFTTK-----YLKMFAYSILYAALITIITLAISYPAAYYIT----RSK--FQNILLMIMIIPTWINLLLKTYAFIGLLSHD-GVINQFFH-LFNL-PSFNLLFTTGA--FLVVASYIYIPFMILPIFNSMKAIPNNLLQASSDLGASPFYTFRKVIMPLTKEGVMTGIQVTFIPSLSLFMITRLIAGNKVINIGTAIEEQFLTI---------------QNYGMGSTIA--IFLIVFMAFILIITKSSNGRG |
| 4KI0 Chain:F ((260-498)) | ---------------------------------------GWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILI----FKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLV---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183793 for 1337 contacts (-137.5/contact) +
2D Compatibility (PS) -20474 + (NN) 2456 + (LL) 5596
1D Compatibility (HY) -26000 + (ID) 2800
Total energy: -225015.0 ( -168.30 by residue)
QMean score : 0.225
|
|
|