Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNQIQKLL-DSDLSSLHISKQTGVPQSTIHRMRKKERSLDNMSLKNAELLYKFANSIFSNEN
1Y9Q Chain:A ((14-66))
--NQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESS---PTIATLWKIASGLEAS-----
General information:
TITO was launched using:
RESULT:
Template:
1Y9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19802 for 324 contacts (-61.1/contact) +
2D Compatibility (PS) -5741 + (NN) -3083 + (LL) 376
1D Compatibility (HY) 0 + (ID) 500
Total energy: -28750.0 ( -88.73 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1Y9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y9Q-query.scw
PDB file :
Tito_Scwrl_1Y9Q.pdb
: