Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK
4QRH Chain:B ((5-209))
-DNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHL-------------------NEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAK-
General information:
TITO was launched using:
RESULT:
Template:
4QRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71236 for 1333 contacts (-53.4/contact) +
2D Compatibility (PS) -20296 + (NN) -9327 + (LL) 1516
1D Compatibility (HY) -27200 + (ID) 9250
Total energy: -135793.0 ( -101.87 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_4QRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QRH-query.scw
PDB file :
Tito_Scwrl_4QRH.pdb
: