Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
4A0Y Chain:A ((6-189))
LKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKR-
General information:
TITO was launched using:
RESULT:
Template:
4A0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94385 for 1362 contacts (-69.3/contact) +
2D Compatibility (PS) -19303 + (NN) -952 + (LL) -172
1D Compatibility (HY) -26400 + (ID) 9150
Total energy: -150362.0 ( -110.40 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_4A0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A0Y-query.scw
PDB file :
Tito_Scwrl_4A0Y.pdb
: