Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE--
1S7O Chain:A ((7-112))
------EKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIADEFGVSRQAVYDNIKRTEKILETYEMKLHMYSDYVVRSEIFDDMIAHYPHDEYLQEKISILTSIDNR
General information:
TITO was launched using:
RESULT:
Template:
1S7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36981 for 665 contacts (-55.6/contact) +
2D Compatibility (PS) -11345 + (NN) -2238 + (LL) 176
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -65188.0 ( -98.03 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_1S7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7O-query.scw
PDB file :
Tito_Scwrl_1S7O.pdb
: