Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVT--EQTRVILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNEDKQILERYKIGLKKG---
1UAL Chain:A ((19-270))
SHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLS---------FADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNSLEHH
General information:
TITO was launched using:
RESULT:
Template:
1UAL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135761 for 1705 contacts (-79.6/contact) +
2D Compatibility (PS) -25771 + (NN) -11387 + (LL) 100
1D Compatibility (HY) -22400 + (ID) 5200
Total energy: -200419.0 ( -117.55 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_1UAL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAL-query.scw
PDB file :
Tito_Scwrl_1UAL.pdb
: