Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEGQQGVSNEEVAAEQNIDLDEKEKSEETEATEE
4TOI Chain:A ((5-232))
-ATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRS-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TOI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117605 for 1840 contacts (-63.9/contact) +
2D Compatibility (PS) -24735 + (NN) -14871 + (LL) 2256
1D Compatibility (HY) -22000 + (ID) 5750
Total energy: -182705.0 ( -99.30 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_4TOI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TOI-query.scw
PDB file :
Tito_Scwrl_4TOI.pdb
: