Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK
1G2R Chain:A ((7-90))
---RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQVFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFSMEVE--ESFYDELIAYVDH-----
General information:
TITO was launched using:
RESULT:
Template:
1G2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39419 for 567 contacts (-69.5/contact) +
2D Compatibility (PS) -8964 + (NN) -4951 + (LL) 968
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -59716.0 ( -105.32 by residue)
QMean score : 0.703
(partial model without unconserved sides chains):
PDB file :
Tito_1G2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2R-query.scw
PDB file :
Tito_Scwrl_1G2R.pdb
: