Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEWDEVITVFNNNKDLDYKSKSKEPIQLLVIMGITVLITLLLWIMLVLIF
3FYM Chain:A ((2-83))
-KTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEW-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FYM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28655 for 575 contacts (-49.8/contact) +
2D Compatibility (PS) -8974 + (NN) -6365 + (LL) 5012
1D Compatibility (HY) -9600 + (ID) 4100
Total energy: -52682.0 ( -91.62 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_3FYM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FYM-query.scw
PDB file :
Tito_Scwrl_3FYM.pdb
: