Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEIETIISEIEKLLTNNTPYSISKNSGVPR---QTVTDLKVGKTKIKEAKFKTIIKLYEYQRTLENKTEC
1XTY Chain:A ((61-103))
VNSLDEIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLGIG----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XTY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11836 for 186 contacts (-63.6/contact) +
2D Compatibility (PS) -4304 + (NN) -1380 + (LL) 2692
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -17578.0 ( -94.51 by residue)
QMean score : 0.846
(partial model without unconserved sides chains):
PDB file :
Tito_1XTY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XTY-query.scw
PDB file :
Tito_Scwrl_1XTY.pdb
: