Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKDADVAIDFSNPNLLFPLLDEEFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
3QY9 Chain:A ((3-243))
SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPK--TPYQQYQHIADVKGADVAIDFSNPNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
General information:
TITO was launched using:
RESULT:
Template:
3QY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168813 for 1840 contacts (-91.7/contact) +
2D Compatibility (PS) -25675 + (NN) -9670 + (LL) 196
1D Compatibility (HY) -32400 + (ID) 11800
Total energy: -248162.0 ( -134.87 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_3QY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QY9-query.scw
PDB file :
Tito_Scwrl_3QY9.pdb
: