Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MSDRFIKFNDEQLDAKQVMMLQ---DLARLLLKN---EQTQVKIQKFPYYNPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGYHMMDVQIVNEVVQDKTFKHPKFYQQLFKLLE-DMRVLNSIKVERPSTAKLI------DLRLDTRVSYTES----------QIKVYRTKTQYTDLLF-------LYL---------------EHAFLSQDFFDI--------PSIHSDLDDIL-VNMFLYLPNFFQ------NQNSEDN----MYLAQRIM-------YQVDDILKEDMLNEYYY-------LPK------------TLYNTLA------SPEFDDLKRTD----ASQVDGQDDTSEDDDNESEKADSKSADSE---SKGGAYLEMELHE------GQNSETLGNDEAREGDATDDMTDMMTKKGKGSND-----------------------TLNR--EEGDAVGQSQAFQLDGVNKNVEIKWQIP------------EIEPQYVLEYQESKQDVQYEIKDLIQIIKK-------TIEREQRDARFNLTK---GRLQKDLINWFIDDQYKLFY-KKQDLSKSFD-----------ATFTLLIDASASMHDKMAETKKGVVLFHETLKAL-----------------NIKHEIL----------------------SFSEDAFDSDDHAQPNIINEIINYDYSTFEKDGPRIMALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYSQDGIIDTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQ-----TIHNIYGQYAI---FVEGVAHLPGHLSPLLKKLLLKSL----------------------------- |
| 4WZ9 Chain:A ((40-926)) | QAVDERYRLPTTSIPIHYDLHLRTE-IHRNERTFTGTVGIQLQVVQATDKLVMHNRGLVMSSAKVSSLPNGVTGAPTLIGDVQYSTDTTF-EHITFTSPTILQP-GTYLLEVAFQGRLATND----DGFYVSSYVADNGERRYLATTQFESTSARMAFPCYDEPGLKATFTVSITHSLSYKAISNMPQKTTTDIETDMRTTFFEKTPAMSTYLLAFVVSDFQLRLSGAQRVYVRPNAFNEATFALEAGVKILKVLDDHLGIPYDTYMPKLDQIAIPDFAAGAMENWGLVTYREQALLFNPAVSTYRGKTNVATTIAHEYAHQWFGNLVSPEWWEYIWLNEGFATLYEFYALDMAYPGQEYWELFNQQVIQYAMGQDGQASTRPMNWNAATPGEISALFDRVAYDKSGSVLNMMRHVLGDDNWKAGLKAYLTDRALQGAVDEQLYAGLQSAIEGKGVLPNGVTVAQIMRTWTNEAGYPVLNVRRSYDTGDVIISQERFYNDRKVPNTNI-WMIPYNYVHQAKADFNEFDDFQWLATKAARIETTVPANEWIVFNKQQVGYYRVNYDEHNWELITNALHENWASIHRLNRAQLIDDAYWLARSGRLDLRVALRFMTYLRNEREYAPWTAANVALTYFNNRLRGTAE-YHNFLIFVDALIEDIYSLLTIDAVSPDDTLLHKYLVQTISTWACSMGYTDCLMKTAALLKAEASGTGPAVHPDIASVTYCYGMRSALESEFQYLYRKMMNSKN--LAERTMLIDSLGCSNNKEFLKAFLTTALGSINYRADERRRVVQAIYSGGRTGVDALIEFLMDPALVNEFVSTLSTSTLNSALSAIASRTNNVEEMNKLNALITALGSRVNSQTAANLRTTAQANLDWVNGFEGLMLSNFLAEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17338 for 4182 contacts (-4.1/contact) +
2D Compatibility (PS) -63495 + (NN) -140 + (LL) 364
1D Compatibility (HY) -16400 + (ID) 6050
Total energy: -103059.0 ( -24.64 by residue)
QMean score : 0.172
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