Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLR--LIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN
4PX7 Chain:A ((107-233))
-----------------------------------------------------------------------VIWLEKTHHMPVDKFYTLKRAERGNL---VKEQLAE--PQYLRSHWQKETGFAFPSGH----TMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQR----
General information:
TITO was launched using:
RESULT:
Template:
4PX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75193 for 731 contacts (-102.9/contact) +
2D Compatibility (PS) -12448 + (NN) -3100 + (LL) 7888
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -90953.0 ( -124.42 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_4PX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PX7-query.scw
PDB file :
Tito_Scwrl_4PX7.pdb
: