Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
3H4Q Chain:A ((20-187))
MIRLGKMSDLDQILNLVEEAKELMK----------YPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKV--------------PFYAYYKNLK-
General information:
TITO was launched using:
RESULT:
Template:
3H4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113248 for 1069 contacts (-105.9/contact) +
2D Compatibility (PS) -15703 + (NN) -9394 + (LL) 808
1D Compatibility (HY) -23600 + (ID) 7100
Total energy: -168237.0 ( -157.38 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_3H4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H4Q-query.scw
PDB file :
Tito_Scwrl_3H4Q.pdb
: