Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNYSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILSDYIETHGDFTLPMSVFDDLYEEYTEWLKF
2O6K Chain:A ((4-73))
---YSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILSDYIETHGDFTLPMSVFDDLYEEYTEWLKF
General information:
TITO was launched using:
RESULT:
Template:
2O6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9887 for 443 contacts (22.3/contact) +
2D Compatibility (PS) -6985 + (NN) 327 + (LL) 192
1D Compatibility (HY) 2800 + (ID) 600
Total energy: 5621.0 ( 12.69 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_2O6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6K-query.scw
PDB file :
Tito_Scwrl_2O6K.pdb
: