Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKSLFEQARPILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDITTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTFRAEEDYVDHRRPSGVTFVRDLYEDLQRRDFTMNAIAMDTAYKLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMIRCLRFQSQLSFDIAMETFEAMRTQMADIKFLSIERIVIELTKLMRGINVEESFNHLKSLKAFNYMPYFEQLDMNQINVTEPIDLELLI------AIVSVKFDINYS---LKPLKLSNRQVKDINQYIQIMNAL-----PSIITKEQLKMFVYDYDTNLIKNVMVAADVLKANDIQGHEPLIVNLQTIDETLHRLPMHNRKDMMVNGGVLMAHLNAKSGPWLKDVLRQIEIAIVTGKVSNEETEILKWVDNHVKI |
| 1MIW Chain:A ((2-393)) | --KPPFQEALGIIQQLKQHGYDAYFVGGAVRDLLLGRPIGDVDIATSALPEDVMAIFPKTIDVGSKHGTVVVVHKGKAYEVTTFKTDG---------SVTFVRSLEEDLKRRDFTMNAIAMDEYGTIIDPFGGREAIRRRIIRTVGEAEKRFREDALRMMRAVRFVSELGFALAPDTEQAIVQNAPLLAHISVERMTMEMEKLLGGPFAARALPLLAETGLNAYLPGLAGKE-KQLRLAAAYRWPWLAAREERWALLCHALGVQESRPFLRAWKLPNKVVDEAG---AILTALADIPRPEAWTNEQL--FSAGLERALSVETVRAA-FTGAPPGPWHEKLRRRFAS-------LPIKTKGELAVNGKDVIEWVGKPAGPWVKEALDAIWRAVVNGEVENEKERIYAWL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215820 for 2902 contacts (-74.4/contact) +
2D Compatibility (PS) -38726 + (NN) -9791 + (LL) 2112
1D Compatibility (HY) -29200 + (ID) 7300
Total energy: -298725.0 ( -102.94 by residue)
QMean score : 0.429
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